<!-- mcp-name: io.github.verrysimatupang99/aegis -->

Aegis

A transparent, constitution-bound defensive security copilot. Ships a CLI, an MCP server (Claude Desktop, Claude Code, Codex CLI/Desktop, Cursor, Continue, Zed), an optional cloud or local LLM advisor, an HTML report exporter, and an evaluation harness.

aegis scan ~/some/repo
aegis report --severity critical --html out/report.html
aegis-mcp                                # stdio MCP server

Why this exists

This project is the inverse of an obfuscated abuse toolkit: defensive only, inspectable by design, and bound by a charter the agent cannot rewrite.

Three ideas guide it:

• Project Glasswing (Anthropic) - defensive collaboration and shareable

security artifacts. Aegis stores findings as a portable SQLite index and records every decision in an append-only journal.

• Claude Mythos - the constitution-as-character idea. Aegis loads

data/mythos.yaml, hashes it, and refuses to act outside its hard rules.

• JetBrains Shared Indexes - heavy analysis, computed once, shared. Aegis

ships its index in the same shape so a teammate can clone the audit baseline without re-scanning.

Layout

src/aegis/
  core/            constitution, journal, policy gate, shared index, llm
  scanners/        secrets, obfuscation, dependencies, filesystem, yara
  intel/           local_llm, report_html
  cli/main.py      `aegis` command
  mcp/server.py    `aegis-mcp` MCP stdio server
data/mythos.yaml   the charter; edit to harden, not to weaken
data/yara/         bundled YARA rules (used when yara-python is installed)
docs/              architecture, client configs, marketplace playbook
eval/              labeled fixtures + harness producing JSON precision/recall
tests/             pytest suite, including end-to-end MCP dispatch

Quick start

python3 -m venv .venv
. .venv/bin/activate
pip install -e .[dev]              # core + tests
pip install -e .[all]              # core + tests + LLM extras + yara

aegis charter                       # active constitution + fingerprint
aegis scan ~/some/repo              # walk + hash + run all scanners
aegis report --severity critical
aegis report --html out/report.html
aegis advise --severity high        # cloud Claude (needs ANTHROPIC_API_KEY)
aegis advise --severity high --local --model llama3.1
aegis serve mcp                     # stdio MCP for clients
aegis journal --limit 50            # replay every decision

The shared index lives at data/index.sqlite. Copy it to share an audit baseline; recipients run aegis report against it without rescanning.

Connecting to MCP clients

Aegis is published to the MCP Registry as io.github.verrysimatupang99/aegis and to PyPI as aegis-sec. You don't need to clone this repo to use it. Same shape works in Claude Desktop, Claude Code, Codex, Cursor, Continue, and Zed:

{
  "mcpServers": {
    "aegis": {
      "command": "uvx",
      "args": ["--from", "aegis-sec", "aegis-mcp"]
    }
  }
}

Codex uses servers instead of mcpServers but the command is identical. See docs/clients/README.md for per-client config file paths and verification steps.

Design rules

1. Defensive only. The charter blocks any action that resembles spam,

doxing, exploitation against third parties, or ban tooling.

1. No silent network. Outbound calls require a host on the charter

allowlist or an explicit --allow-exfil <host>. Both are journaled.

1. No secret echoing. Detected credentials are SHA-256 fingerprinted

before they touch the index, the journal, or any LLM context.

1. Reversible first. Destructive tools require --i-mean-it.
2. Charter immutable at runtime. Aegis hashes mythos.yaml on load and

treats prompt-injection text in scanned files as data, not orders.

Smoke test against a known-bad sample

The first thing Aegis was tested on is the obfuscated loader from the toolkit it replaced. The verdict was unambiguous:

[critical] obfuscation/obfuscated_loader  /tmp/arctryx-trash-*/start
    entropy: 11.478
    exotic_ratio: 0.7442
    longest_line: 4_835_152
    signals: long_line, danger_tokens, exotic_unicode, high_entropy,
             self_extract, anti_debug

If that archive is still present, pytest reruns the smoke test automatically; otherwise it skips itself.

Evaluation

python -m eval.run --fixtures eval/fixtures --report eval/last_run.json

Three fixture cases ship in-tree (secrets, obfuscation, dependencies). Add your own by dropping <case>/input/ plus <case>/expected.json. The harness prints precision/recall/F1 per case and aggregate; the JSON output is what we publish to leaderboards.

See docs/marketplace.md for the playbook on getting Aegis listed in MCP marketplaces and where to source third-party accuracy benchmarks (the "LLM ranking" piece).

Differential gate

aegis scan src                                  # build current index
python -m aegis.cli.diff baseline.sqlite data/index.sqlite \
  --fail-on critical,high

Compares two shared indexes by (scanner, rule, fingerprint). The gate exits non-zero when new findings appear at the requested severities. Drop a baselines/index.sqlite in your repo and the bundled GitHub Actions workflow will run the diff on every PR.

LLM-advise leaderboard

We do not chase generic LLM leaderboards for the deterministic detection layer. For the LLM-mediated aegis advise step we ship our own reproducible board:

# offline smoke (no API key, no network)
python -m eval.llm_advise.runner --model mock:default \
  --out eval/llm_advise/results-mock.json

# any provider that fits the adapter
python -m eval.llm_advise.runner --model anthropic:claude-3-5-sonnet-latest \
  --out eval/llm_advise/results-claude35.json
python -m eval.llm_advise.runner --model local:llama3.1 \
  --out eval/llm_advise/results-llama3.json

python -m eval.llm_advise.leaderboard eval/llm_advise/results-*.json \
  --out eval/llm_advise/leaderboard.json

Each model is scored against rubrics in eval/llm_advise/prompts.jsonl (must-mention terms, must-not-mention leaks). The leaderboard table is markdown-friendly and ready to embed in the repo or marketplace listing. See docs/marketplace.md for the publishing playbook.

Scanners shipped

CI integration

• .github/workflows/ci.yml runs pytest + eval.run on every push/PR (matrix py3.11+3.12).
• .github/workflows/pr-comment.yml posts an Aegis defensive diff as a sticky PR comment, fails the build when new critical/high findings appear vs baselines/index.sqlite.
• .github/workflows/release.yml builds, signs with sigstore, and publishes to PyPI via trusted publishing on v* tags.

LLM-as-judge phase 2

After running the rubric scorer, you can score responses with a judge model:

python -m eval.llm_advise.judge \
  --in  eval/llm_advise/results-claude35.json \
  --out eval/llm_advise/results-claude35.judged.json \
  --judge anthropic:claude-3-5-sonnet-latest

# offline path:
python -m eval.llm_advise.judge \
  --in  eval/llm_advise/results-mock.json \
  --out eval/llm_advise/results-mock.judged.json \
  --judge mock:strict

Judge output is a strict JSON: accuracy, defensiveness, specificity (1-5 each), and an explicit leak flag. We aggregate per-model into the leaderboard.

Marketplace listings

Aegis is published to the official MCP Registry. Discovery sites (PulseMCP, mcp.so, MCP Hunt, MCP.ing) typically index from there automatically. Smithery and Glama require manual submission via their web UI:

• Submit to Smithery — upload the .well-known/mcp/server-card.json

card or point to the PyPI package aegis-sec.

• Submit to Glama — fill the form linking

to https://github.com/verrysimatupang99/aegis and the PyPI package.

Direct discovery URLs once the indices catch up:

• MCP Registry: https://registry.modelcontextprotocol.io/v0/servers?search=io.github.verrysimatupang99/aegis
• PyPI: https://pypi.org/project/aegis-sec/

Roadmap

• More scanners (Dockerfile hardening, IaC misconfig, browser extension

manifests, mobile app permissions).

• Differential mode: compare two indexes and surface only newly-introduced

findings (CI gate).

• Signed releases (sigstore / cosign).
• Web UI on top of the shared index.

License

MIT.