Obsidian Vault

Vault location

Assume the user is running this skill from inside a vault. Resolve the vault root using git:

VAULT=$(git rev-parse --show-toplevel)

All commands below use $VAULT. Mostly flat at root level.

Naming conventions

• Index notes: aggregate related topics (e.g., Ralph Wiggum Index.md, Skills Index.md, RAG Index.md)
• Title case for all note names
• No folders for organization - use links and index notes instead

Linking

• Use Obsidian [[wikilinks]] syntax: [[Note Title]]
• Notes link to dependencies/related notes at the bottom
• Index notes are just lists of [[wikilinks]]

Workflows

Search for notes

VAULT=$(git rev-parse --show-toplevel)

# Search by filename
find "$VAULT" -name "*.md" | grep -i "keyword"

# Search by content
grep -rl "keyword" "$VAULT" --include="*.md"

Or use Grep/Glob tools directly on the vault path.

Create a new note

1. Use Title Case for filename
2. Write content as a unit of learning (per vault rules)
3. Add [[wikilinks]] to related notes at the bottom
4. If part of a numbered sequence, use the hierarchical numbering scheme

Find related notes

Search for [[Note Title]] across the vault to find backlinks:

VAULT=$(git rev-parse --show-toplevel)
grep -rl "\\[\\[Note Title\\]\\]" "$VAULT"

Find index notes

VAULT=$(git rev-parse --show-toplevel)
find "$VAULT" -name "*Index*"

Find untagged references

Detect note titles mentioned in prose that aren't wrapped in [[wikilinks]]. This catches references the author forgot to link.

1. Build a list of all note titles (filenames without .md)
2. For each title, search the vault for occurrences that are NOT inside [[ ]]
3. Report the file, line, and unlinked mention

VAULT=$(git rev-parse --show-toplevel)

# Get all note titles
titles=$(find "$VAULT" -name "*.md" -printf '%f\n' | sed 's/\.md$//')

# For each title, find mentions not wrapped in [[ ]]
for title in $titles; do
  grep -rn --include="*.md" "$title" "$VAULT" \
    | grep -v "\[\[$title\]\]" \
    | grep -v "^.*/$title\.md:"
done

Or use Grep to search for a specific title and manually check which hits lack wikilink syntax.

Find duplicate or misspelled tags

Detect tags that look like near-duplicates (case differences, typos, plural/singular variants).

1. List all unique tags across the vault:

VAULT=$(git rev-parse --show-toplevel)

grep -roh '#[A-Za-z0-9_/-]\+' "$VAULT" --include="*.md" \
  | sort | uniq -c | sort -rn

1. Find case-insensitive duplicates (e.g., #RAG vs #rag vs #Rag):

grep -roh '#[A-Za-z0-9_/-]\+' "$VAULT" --include="*.md" \
  | sort -u | awk '{lower=tolower($0); if (seen[lower]++) print prev[lower], $0; else prev[lower]=$0}'

1. Spot low-frequency tags that may be typos of common ones:

grep -roh '#[A-Za-z0-9_/-]\+' "$VAULT" --include="*.md" \
  | sort | uniq -c | sort -n | head -30

Review the low-count tags against the high-count list. Tags used only once or twice are likely misspellings of an existing tag.

1. Find where a suspicious tag is used so you can fix it:

grep -rn '#suspicioustag' "$VAULT" --include="*.md"