ptdit-protoken-inference — independently scanned and version-tracked by SaferSkills.
SaferSkills independently audited ptdit-protoken-inference (Agent Skill) and scored it 100/100 (green). The audit ran 55 deterministic rules across Security, Supply Chain, Maintenance, Transparency, and Community; it found 0 high-severity and 0 lower-severity findings. The full rule-by-rule trace and per-finding evidence are below. Free, methodology-open.
Findings & checks · 0 flagged
Every scanned point with the score it earned and what moved between them.
First recorded scan — no prior version to compare against.
The primary manifest — the file an agent reads to learn what this artifact does.
用于 ProToken 结构 token 化/解码和 PT-DiT latent 生成。若只需骨架到序列 inverse folding，用 ../proteinmpnn-inference/SKILL.md。
{onescience_path}/onescience/examples/biosciences/_manifests/model_requests/ptdit_protoken_request.yaml：embedding、ckpt、nres、decode、batch 和输出模板。references/ptdit_protoken_execution.md：PT-DiT / ProToken 联动与常见错误。pt_dit.md 和 protoken.md。{onescience_path}/onescience/examples/biosciences/pt_dit/example_scripts/de_novo_design.py。src/onescience/flax_models/protoken/scripts/infer.py 或 decode_structure.py。protoken_emb.pkl、aatype_emb.pkl、PT-DiT ckpt、ProToken ckpt、nres、device count、padding。result.pkl、token indexes、optional PDB、序列/结构长度、是否成功 decode。nres、embedding 维度和 checkpoint 必须配套。~30 seconds. Free. No account. Every finding cites a rule and a line of evidence.