snakemake-toy-workflow-starter — independently scanned and version-tracked by SaferSkills.
SaferSkills independently audited snakemake-toy-workflow-starter (Agent Skill) and scored it 100/100 (green). The audit ran 55 deterministic rules across Security, Supply Chain, Maintenance, Transparency, and Community; it found 0 high-severity and 0 lower-severity findings. The full rule-by-rule trace and per-finding evidence are below. Free, methodology-open.
Findings & checks · 0 flagged
Every scanned point with the score it earned and what moved between them.
First recorded scan — no prior version to compare against.
The primary manifest — the file an agent reads to learn what this artifact does.
Provide a small, readable Snakemake workflow that can be executed locally, inspected, and adapted into larger scientific pipelines.
examples/data/input.txtexamples/config.yamlresults/copied.txtresults/summary.jsonslurm/envs/snakemakeexamples/Snakefile and examples/config.yaml.python3 skills/reproducible-workflows/snakemake-toy-workflow-starter/scripts/check_workflow_layout.py.python3 skills/reproducible-workflows/snakemake-toy-workflow-starter/scripts/run_snakemake_workflow.py --workspace scratch/snakemake-toy-workflow --summary-out scratch/snakemake-toy-workflow/run_summary.json.results/copied.txt, results/summary.json, and the wrapper summary JSON.snakemake --version works from the repo-managed prefix.--cores 1.slurm/envs/snakemake.python3 .../check_workflow_layout.pypython3 .../run_snakemake_workflow.py --workspace scratch/snakemake-toy-workflow --summary-out scratch/snakemake-toy-workflow/run_summary.jsonslurm-job-debug-templatescanpy-qc-starternextflow-hello-workflownf-core-pipeline-list~30 seconds. Free. No account. Every finding cites a rule and a line of evidence.