Engineering Advanced

Advanced engineering patterns for AI-native startups building agents, RAG systems, APIs, and scalable infrastructure.

Keywords

Agent design, RAG, retrieval augmented generation, MCP, API design, REST, GraphQL, CI/CD, GitHub Actions, Docker, Kubernetes, microservices, event-driven, message queues, caching, database design, system design, observability, infrastructure as code, AI pipeline

Core Domains

1. Agent Design

Agent architecture patterns:

Agent design principles:

• Give agents clear, specific instructions (not vague goals)
• Define tool boundaries (what the agent CAN and CANNOT do)
• Implement guardrails (content filters, action limits, human-in-the-loop)
• Design for failure (retry logic, fallback paths, error handling)
• Observe everything (log prompts, responses, tool calls, latency)

Agent evaluation:

• Task completion rate
• Average tokens per task
• Tool call efficiency (fewer calls = better)
• Error rate and recovery success
• User satisfaction / output quality

2. RAG Architecture

RAG pipeline components:

Documents → Chunking → Embedding → Vector Store → Retrieval → Generation

Chunking strategies:

Retrieval optimization:

• Hybrid search: Vector similarity + keyword (BM25)
• Re-ranking: Cross-encoder after initial retrieval
• Metadata filtering: Pre-filter by date, source, category
• Query expansion: Generate multiple query variations
• Contextual compression: Summarize retrieved chunks

Vector databases:

RAG quality metrics:

• Retrieval precision: % of retrieved chunks that are relevant
• Retrieval recall: % of relevant chunks that are retrieved
• Faithfulness: Does the answer match the retrieved context?
• Answer relevancy: Does the answer address the question?

3. API Design

REST API design rules:

• Use nouns for resources (/users, not /getUsers)
• HTTP methods: GET (read), POST (create), PUT (replace), PATCH (update), DELETE
• Consistent naming: snake_case for JSON, plural nouns for collections
• Pagination: Cursor-based for real-time data, offset for static
• Versioning: URL path (/v1/) preferred over headers
• Error responses: Consistent format with error code, message, details

API response format:

{
  "data": { ... },
  "meta": { "page": 1, "total": 100 },
  "errors": null
}

Error response format:

{
  "error": {
    "code": "VALIDATION_ERROR",
    "message": "Email is required",
    "details": [{ "field": "email", "issue": "missing" }]
  }
}

Rate limiting:

• Return 429 Too Many Requests with Retry-After header
• Implement per-user and per-IP limits
• Use sliding window algorithm
• Document limits clearly in API docs

4. CI/CD Pipeline Architecture

Pipeline stages:

Push → Lint → Test → Build → Security Scan → Deploy (Staging) → Deploy (Production)

GitHub Actions best practices:

• Cache dependencies (node_modules, pip cache)
• Run tests in parallel where possible
• Use matrix builds for multiple environments
• Pin action versions (don't use @latest)
• Store secrets in GitHub Secrets, not in code
• Keep workflows DRY with reusable workflows

Deployment strategies:

5. MCP Server Building

MCP (Model Context Protocol) server structure:

• Define tools with clear names and descriptions
• Input schemas using JSON Schema
• Handle errors gracefully with informative messages
• Implement authentication if accessing external services
• Test with Claude Code or Claude Desktop

MCP tool design principles:

• One tool, one job (Single Responsibility)
• Clear parameter names and descriptions
• Return structured data (JSON), not prose
• Include examples in tool descriptions
• Handle edge cases (empty results, timeout, rate limits)

6. Observability

Three pillars:

1. Logs: Structured (JSON), with correlation IDs, appropriate levels
2. Metrics: Business metrics (conversions, revenue), technical metrics (latency, error rate)
3. Traces: Distributed tracing across services (OpenTelemetry)

Essential alerts:

• Error rate > X% for Y minutes
• P99 latency > Xms
• CPU/Memory > 80% sustained
• Queue depth growing
• 5xx responses from dependencies

Tool recommendations:

• Logging: Structured logging → Datadog, Grafana Loki, CloudWatch
• Metrics: Prometheus + Grafana, Datadog
• Tracing: OpenTelemetry → Jaeger, Datadog
• Error tracking: Sentry
• Uptime: Betteruptime, Checkly

Reference Files

• references/agent-design.md — Agent architecture, evaluation, prompt engineering
• references/rag-architecture.md — RAG pipeline design, chunking, retrieval optimization
• references/api-design.md — REST/GraphQL patterns, versioning, error handling
• references/cicd.md — Pipeline architecture, deployment strategies, GitHub Actions
• references/mcp-builder.md — MCP server development, tool design, testing